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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs11986386 chr8:112745337 T/C KRT6C chr12:52862300-52867569:- 0.7 8.16 7.09E-11 Box Plot
ACC rs11993991 chr8:112825432 C/T KRT14 chr17:39738531-39743173:- 1.14 7.63 4.9E-10 Box Plot
ACC rs11993991 chr8:112825432 C/T KRT6C chr12:52862300-52867569:- 0.82 11.71 3.41E-16 Box Plot
ACC rs11994137 chr8:112840850 T/C KRT6C chr12:52862300-52867569:- 0.78 10.71 9.2E-15 Box Plot
ACC rs11995955 chr8:112993854 T/C KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs11997809 chr8:14402127 T/C OR5V1 chr6:29323007-29399744:- 0.62 9.12 2.3E-12 Box Plot
ACC rs11998070 chr8:112740847 A/G KRT6C chr12:52862300-52867569:- -0.84 -10.9 4.89E-15 Box Plot
ACC rs12025215 chr1:200450366 A/G PRHOXNB chr13:28552243-28562774:- 0.68 9.34 1.03E-12 Box Plot
ACC rs12032068 chr1:178172079 G/A PRAMEF16 chr1:13495254-13498260:+ 0.83 11.82 2.35E-16 Box Plot
ACC rs12074436 chr1:20859701 C/T PRAMEF6 chr1:12998302-13007406:- 0.77 8.08 9.35E-11 Box Plot
ACC rs12140855 chr1:236167934 C/T PRHOXNB chr13:28552243-28562774:- 0.59 7.83 2.4E-10 Box Plot
ACC rs12148129 chr15:99217474 G/T PRHOXNB chr13:28552243-28562774:- -0.6 -7.68 4.1E-10 Box Plot
ACC rs12191297 chr6:42029906 G/A KRT6B chr12:52840435-52845910:- 1.06 7.55 6.53E-10 Box Plot
ACC rs12193078 chr6:42030878 C/G KRT6B chr12:52840435-52845910:- 1.06 7.55 6.53E-10 Box Plot
ACC rs12203154 chr6:42029866 A/G KRT6B chr12:52840435-52845910:- 1.06 7.55 6.53E-10 Box Plot